Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907248.1_cds_XP_016457388.1_51120
CDS Infomation

[gene=LOC107781229] [db_xref=GeneID:107781229] [protein=probable protein phosphatase 2C 60] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016457388.1] [location=complement(join(65490..65738,66447..66683,67141..67508,67615..>67786))] [gbkey=CDS]
Sequence

ATGGCAGTTGTTCAGGCCAACAATTTGCTGGAGGATCAAAGTCAGATTGAGTCGGGTTCT
CTGAGCTTGCTCGATTCTGGCCCCTATGGAACGTTTGTCGGGGTATATGATGGTCATGGT
GGGCCTGAAACATCACGTTATATCAATGATCACCTCTTTCAGCATCTCAAGAGGTTTGCA
GCTGAACAAAATTCCATGTCTGTTGACGTAATACGAAAAGCATTTCAAGCAACAGAGGAG
GGATTCCTTTCTCTGGTTGTTAAGCAGTGGCCAACGAAACCTCAGATGGCTGCTGTCGGA
TCTTGCTGTCTGGTTGGAGTGATCTGCGATGGGACCCTTTATGTCGCGAACCTTGGTGAT
TCCCGGGCTGTTTTGGGGAGACTTGTCAAGGCTACAGGAGAAGTTCTAGCCCTCCAGCTT
TCAGCTGAGCATAATGCAAGTTTTGAGTCCGTCAGACAGGAATTACATTCTATGCATCCC
GATGACCCACAGATAGTGGTTTTGAAGCATAATGTATGGCGTGTAAAGGGTCTGATACAG
ATTACGAGATCCATTGGCGATTTATATCTCAAAAATGCTGAGTACAATAAGGAGCCATTG
TATGCAAAATTTCGTTTGCGAGAACCTTTCAAAAGGCCCTTATTGAGCGCGGATCCATCA
ATTTCAGTGCATGAACTTGAACCACATGATCAATTTCTCATACTTGCTTCTGATGGTCTT
TGGGAACATCTTAGCAATCAAGAAGCAGTTGATATCGTCCAAAATAGCTCTCACAGCGGA
AGTGCTCGGCGGCTTGTAAAAGCTGCTTTGCAAGAAGCGGCAAAGAAAAGGGAGATGAGG
TATTCTGACCTGAAGAAGATTGATCGTGGGGTGAGGAGACATTTTCATGATGATATCTCT
GTCATAGTCGTGTTTCTAGATTCAAATCTTGTGAGTAGAGCCACATCACTTAGAGGGCCC
TCTGTATCTCTGAGAGGAGGTGGTGTGAACCTCCTAGCAAGAAGTCTAGCTCCCACTCCC
ACATAA

Peptide Sequence

PEP ID

XP_016457388.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 60 [Nicotiana tabacum]
Sequence

MLSRLINFLRACWRPSSDRSVYAGSDAAGRQDGLFWYKDSGQHLIGEFSMAVVQANNLLE
DQSQIESGSLSLLDSGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFAAEQNSMSVDVI
RKAFQATEEGFLSLVVKQWPTKPQMAAVGSCCLVGVICDGTLYVANLGDSRAVLGRLVKA
TGEVLALQLSAEHNASFESVRQELHSMHPDDPQIVVLKHNVWRVKGLIQITRSIGDLYLK
NAEYNKEPLYAKFRLREPFKRPLLSADPSISVHELEPHDQFLILASDGLWEHLSNQEAVD
IVQNSSHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVIVVFLDSNLV
SRATSLRGPSVSLRGGGVNLLARSLAPTPT

Transcript Sequence

Gene sequence data has not been registered.